Timeline
13/10/08:
- 17:07 Changeset [17120] by julie
- checkstyle
- 16:13 Changeset [17119] by julie
- update to trunk
- 15:32 Changeset [17117] by jakub
- Checkstyle fix.
- 15:21 Changeset [17116] by jakub
- List tagging fixes
- 15:21 Changeset [17115] by jakub
- List tagging fixes
- 15:01 Changeset [17114] by contrino
- modmine tile: removed display of primaryIdentifier (feature query)
- 15:00 Changeset [17113] by julie
- enrichment query tidy
- 14:50 Changeset [17112] by contrino
- modmine tile: before removing primaryidentifier (features)
- 14:42 Changeset [17111] by contrino
- modmine meta: added creation of temp table for submission features. Note: …
- 12:40 Changeset [17110] by julie
- update default templates
- 10:17 Widgets edited by julie
- (diff)
- 09:44 Changeset [17108] by contrino
- modmine: modencode-static -> modmine-static
10/10/08:
- 17:27 Changeset [17107] by kmr
- Undo [17035].
- 16:48 Widgets edited by julie
- (diff)
- 16:47 Widgets edited by julie
- (diff)
- 16:46 Changeset [17106] by julie
- link attribute optional for enrichment widgets
- 16:38 Changeset [17105] by rns
- Fixed error in ant to copy dbmodel/resources to build/model.
- 16:36 Changeset [17104] by kmr
- Fixed flybasemine logo.
- 16:28 Changeset [17103] by kmr
- Logo fix for flybasemine.
- 16:24 Widgets edited by julie
- (diff)
- 16:11 Changeset [17102] by kmr
- Merge trunk changes into flybasemine branch.
- 15:57 Changeset [17101] by kmr
- Merge trunk changes into flybasemine branch.
- 15:42 Changeset [17100] by julie
- remove unused entries from webconfig
- 15:37 Widgets edited by julie
- (diff)
- 15:27 Changeset [17099] by rns
- When building a war file exclude extra.project.dependencies from jars to …
- 15:21 Changeset [17098] by jakub
- Code formated.
- 15:12 Changeset [17097] by julie
- title, url link are now optional for graph widgets
- 15:12 Changeset [17096] by jakub
- List tagging refactored and added documentation.
- 15:12 Changeset [17095] by jakub
- List tagging refactored and added documentation.
- 14:37 Changeset [17094] by julie
- Use actual class of object instead of LocatedSequenceFeature? otherwise the …
- 14:15 Changeset [17093] by kmr
- Added widgets back into flybasemine.
- 14:14 Changeset [17092] by jakub
- List tagging refactoring.
- 14:14 Changeset [17091] by jakub
- List tagging refactoring.
- 14:09 Changeset [17090] by kmr
- Log fix for flybasemine.
- 13:57 Changeset [17089] by kmr
- Removed unneeded directories in flybasemine.
- 13:47 Changeset [17088] by kmr
- Moved static properties to the appropriate mine. Refs #1885.
- 13:38 Changeset [17087] by kmr
- Merge [17033] into flybasemine branch.
- 12:31 Changeset [17086] by jakub
- Refactoring. Removed old implementation of AJAX Prototype services. …
- 12:31 Changeset [17085] by jakub
- Refactoring. Removed old implementation of AJAX Prototype services. …
- 11:53 Changeset [17084] by kmr
- Merge ticket branch for #1885 into trunk. (Keys can now be in mines). Refs …
- 11:53 Changeset [17083] by rns
- fix testmodel/webapp/test properties location.
- 11:20 Changeset [17082] by kmr
- Don't display the geneMicroArrayDisplayer.tile in modmine.
- 11:14 Widgets edited by julie
- (diff)
- 11:03 Widgets edited by julie
- (diff)
- 10:32 Widgets edited by julie
- (diff)
- 10:24 Changeset [17081] by rns
- Fix testmodel/webapp/test properties file name.
- 10:23 Widgets edited by julie
- (diff)
09/10/08:
- 17:55 Changeset [17080] by kmr
- Removed some debug code. Refs #1885.
- 17:52 Changeset [17079] by watkins
- First step for loop constraint outer join support
- 17:52 Changeset [17078] by watkins
- First step for loop constraint outer join support
- 17:52 Changeset [17077] by watkins
- First step for loop constraint outer join support
- 17:48 Changeset [17076] by kmr
- Put the <mine>/resources directory at the front of the class path …
- 17:42 Changeset [17075] by kmr
- Add the <mine>/integrate/resources directory to the class path …
- 17:28 Changeset [17074] by kmr
- Set the source type to avoid an exception.
- 17:05 Widgets edited by julie
- (diff)
- 16:45 Widgets edited by julie
- (diff)
- 16:30 Changeset [17073] by julie
- update build script with new properties location
- 16:30 Changeset [17072] by julie
- better documentation
- 16:08 Changeset [17071] by kmr
- Pass sourceType to insert-xml-data and convert-fullxml-file.
- 15:57 Widgets edited by julie
- (diff)
- 15:49 Changeset [17070] by watkins
- Sorting is disabled when an outer join is selected. Fixes #1878
- 15:49 Changeset [17069] by watkins
- Sorting is disabled when an outer join is selected. Fixes #1878
- 15:47 Changeset [17068] by mnw21
- Add format version number zero to database, in preparation for swapping …
- 15:43 Changeset [17067] by kmr
- Removed empty directories.
- 15:43 Changeset [17066] by julie
- fixed compilation error
- 15:25 Changeset [17065] by jakub
- List tagging fixes.
- 15:22 Changeset [17064] by kmr
- Eclipse classpath fixes.
- 15:11 Widgets edited by julie
- (diff)
- 15:09 Changeset [17063] by kmr
- Moved chado-db properties files to mine directories. Refs #1885.
- 15:08 Widgets edited by julie
- (diff)
- 15:04 Changeset [17062] by kmr
- Created ticket branch. Refs #1885.
- 15:03 Changeset [17061] by kmr
- Removed #1885 ticket branch. Refs #1885.
- 15:01 Changeset [17060] by kmr
- Merge of code for #1886 into trunk. Needs testing in full build. Refs …
- 14:55 Changeset [17059] by julie
- better documentation
- 14:29 Changeset [17057] by julie
- missing file from [17054]
- 13:58 Changeset [17056] by jakub
- List tagging fixes.
- 13:58 Changeset [17055] by jakub
- List tagging fixes.
- 13:48 Changeset [17054] by julie
- remove partial implementation of #1719. these changes can be restored …
- 12:46 Widgets edited by julie
- (diff)
- 12:25 Changeset [17053] by julie
- allow spaces in path list for widget config. fix bug when exporting …
- 11:57 Changeset [17052] by kmr
- Add type to Source so that the name and type of project.xml sources …
- 11:51 Changeset [17051] by watkins
- Refactored the way sort works in the webapp.
- 11:51 Changeset [17050] by watkins
- Refactored the way sort works in the webapp.
- 11:51 Changeset [17049] by watkins
- Refactored the way sort works in the webapp.
- 11:51 Changeset [17048] by watkins
- Refactored the way sort works in the webapp.
- 11:51 Changeset [17047] by watkins
- Refactored the way sort works in the webapp.
- 11:51 Changeset [17046] by watkins
- Refactored the way sort works in the webapp.
- 11:30 Changeset [17045] by jakub
- List tagging fix.
- 11:27 MacInstallation edited by rns
- (diff)
- 11:24 MacInstallation edited by rns
- (diff)
- 11:18 BuildingTestmodelApp edited by rns
- (diff)
- 11:10 Changeset [17044] by rns
- Copied [17041] to 15.0 branch, renamed testmodel webapp properties.
- 11:01 Changeset [17043] by jakub
- List tagging fix.
- 10:39 Changeset [17042] by julie
- make linking the results in a table widget optional.
08/10/08:
- 18:00 Changeset [17041] by rns
- Fixed name of testmodel webapp properties files, updated examples.
- 17:49 BuildingTestmodelApp edited by rns
- (diff)
- 17:39 Changeset [17040] by kmr
- Added a "type" to the Source class and added a constructor. Refs #1885.
- 17:15 Changeset [17039] by jakub
- List tagging fixes.
- 17:15 Changeset [17038] by jakub
- List tagging fixes.
- 17:07 Changeset [17037] by kmr
- Move chado-db keys to modmine. Refs #1885.
- 16:55 Widgets edited by julie
- (diff)
- 16:51 MacInstallation edited by rns
- (diff)
- 16:49 Changeset [17036] by jakub
- Removed, unintentional commit.
- 16:31 Widgets edited by julie
- (diff)
- 16:24 Changeset [17035] by mnw21
- Switch off retry, so we can get an error report for Postgres
- 16:20 Widgets edited by julie
- (diff)
- 16:10 Changeset [17034] by mnw21
- Updating to trunk
- 16:02 Changeset [17033] by rns
- Properties files now need to be in a .intermine directory in your home …
- 15:55 Changeset [17032] by julie
- remove biojava logs
- 15:35 Changeset [17030] by kmr
- Removed unused directories.
- 15:30 Changeset [17029] by kmr
- Removed flymine message from flybasemine.
- 15:26 Changeset [17028] by kmr
- Added missing model properties files for flybasemine.
- 15:13 Changeset [17027] by jakub
- --
- 15:09 Changeset [17026] by kmr
- Removed unneeded and non-compiling code from flybasemine.
- 15:07 Changeset [17025] by jakub
- --
- 14:43 Changeset [17024] by rns
- Set symbols for human genes, this creates some duplicates so shouldn't be …
- 14:04 Changeset [17020] by kmr
- Fixed model merging problem in chado-db.
- 13:56 Changeset [17019] by julie
- remove all references to tooltips, we don't use them anymore
- 13:53 Changeset [17018] by kmr
- Removed non-compilable code from flybasemine.
- 13:36 Changeset [17017] by julie
- eclipse warning
- 11:53 Changeset [17016] by contrino
- modmine tile: feature count now shows also featureless submissions (Ticket …
- 11:52 Changeset [17015] by kmr
- Try to avoid loading all chromosomes for all submissions in modmine.
- 11:52 Changeset [17014] by kmr
- Added finishedProcessing() method.
- 10:57 Changeset [17013] by kmr
- Don't dump after pubmed-gene.
- 10:50 Changeset [17012] by kmr
- Created ticket branch. Refs #1885.
- 10:13 Changeset [17011] by julie
- remove unneeded properties file
- 10:08 Changeset [17010] by julie
- malariamine tutorial fix
07/10/08:
- 17:35 Changeset [17009] by mnw21
- Up to date with trunk
- 16:42 Prerequisites edited by rns
- (diff)
- 16:40 Prerequisites edited by rns
- (diff)
- 13:24 Changeset [17008] by kmr
- Removed flybasemine.
- 13:24 Changeset [17007] by kmr
- Made a branch for flybasemine.
- 13:16 Changeset [17006] by julie
- malariamine tutorial fix
- 12:49 WebappConf edited by julie
- (diff)
- 12:48 WebappRelease edited by julie
- (diff)
- 12:47 WebappRelease edited by julie
- (diff)
- 12:44 CommonErrors edited by julie
- (diff)
- 12:43 MalariaMine edited by julie
- (diff)
- 12:42 TroubleshootingTips edited by julie
- (diff)
- 12:40 TroubleshootingTips edited by julie
- 12:29 BioSources edited by julie
- (diff)
- 12:28 BioSources edited by julie
- (diff)
- 12:25 BioSources edited by julie
- (diff)
- 12:24 BioSources edited by julie
- (diff)
- 11:51 Changeset [17005] by jakub
- List tagging fixes.
- 11:50 Changeset [17004] by jakub
- List tagging fixes.
- 11:38 Changeset [17003] by julie
- copy fix to 15.0 branch
- 11:37 Changeset [17002] by julie
- config fix for malariamine
- 11:34 Changeset [17001] by kmr
- Added configuration for linking lists of insertions or deletions to …
- 11:27 Changeset [17000] by kmr
- Put temporary autocomplete lucene indexes in a sub directory of …
- 11:24 Changeset [16999] by julie
- copy fix [16998] to 15.0 branch
- 11:23 Changeset [16998] by julie
- fix to affy bulk download
- 11:23 Changeset [16997] by julie
- malariamine template and property fixes
- 10:47 Changeset [16996] by jakub
- List tagging fixes.
- 10:29 PrimaryKeys edited by julie
- (diff)
- 10:26 FAQs edited by julie
- (diff)
- 10:20 Changeset [16995] by julie
- copy [16974] to 15.0 branch
06/10/08:
- 17:50 Changeset [16994] by watkins
- Fixed sort mechanism
- 17:48 Changeset [16993] by watkins
- Fixed sort mechanism
- 17:48 Changeset [16992] by watkins
- Fixed sort mechanism
- 17:40 CommonErrors edited by rns
- (diff)
- 17:20 Changeset [16991] by jakub
- Added tagging of the list at the list analysis page.
- 17:20 Changeset [16990] by jakub
- Removed check, that tagging can do only super user.
- 17:19 Changeset [16989] by jakub
- Refactorings and fixes of the first version of list tagging.
- 17:18 CommonErrors edited by rns
- (diff)
- 17:17 Changeset [16988] by kmr
- Fixed Eclipse classpath for flymine/webapp.
- 17:13 Changeset [16987] by kmr
- Fixed aspects for flybasemine.
- 16:31 Changeset [16986] by contrino
- modmine meta: change of class names
- 16:25 Changeset [16985] by kmr
- Fixed precompute properties for flybasemine.
- 16:11 Changeset [16984] by kmr
- Fixed logo for flybasemine.
- 15:46 Changeset [16983] by kmr
- Better log for flybasemine.
- 15:27 Changeset [16982] by kmr
- Fixed precompute properties for flybasemine.
- 15:26 Changeset [16981] by kmr
- Removed theme for flybasemine.
- 15:22 Changeset [16980] by kmr
- Fixed precompute properties for flybasemine.
- 14:24 Changeset [16979] by kmr
- Removed tips from flybasemine.
- 14:24 Changeset [16978] by kmr
- Fix for [16972].
- 14:21 Changeset [16977] by kmr
- bio-tools-main now doesn't need bio-postprocess-main.
- 14:20 Changeset [16976] by julie
- --
- 14:17 Changeset [16975] by kmr
- Moved PostProcessUtil?.findLocationAndObjects() to BioQueries? in …
- 14:15 Changeset [16974] by julie
- malariamine update
- 14:13 Changeset [16973] by kmr
- Fix for [16972].
- 14:11 Changeset [16972] by kmr
- Created bio.util.Constants
- 14:03 Changeset [16971] by kmr
- Remove news from flybasemine.
- 13:59 Changeset [16970] by jakub
- Added feature of hierarchical tags.
- 13:33 Changeset [16969] by kmr
- Fixed webconfig for flybasemine.
- 13:21 Changeset [16968] by kmr
- Fixed webconfig for flybasemine.
- 13:13 Changeset [16967] by kmr
- Fixed webconfig for flybasemine.
- 12:59 Changeset [16966] by julie
- update to trunk
- 12:52 Changeset [16965] by julie
- update to trunk
- 12:00 Changeset [16964] by kmr
- Property fixes for flybasemine.
- 11:52 Changeset [16963] by kmr
- flybasemine now uses flybasemine.properties
- 11:45 Changeset [16962] by kmr
- Removed unneeded directory.
- 11:27 Changeset [16961] by kmr
- Added a temporary flybasemine.
- 10:21 Changeset [16960] by contrino
- date in news: modified to remove timestamp
03/10/08:
- 16:35 Changeset [16958] by julie
- example flymine property files
- 16:34 FlyMineOwnData edited by julie
- (diff)
- 16:33 MirrorHowTo edited by julie
- (diff)
- 16:18 Changeset [16957] by julie
- fix columns of indirection tables
- 13:58 Changeset [16955] by julie
- ensembl stopped using default port after version 47
- 13:57 Changeset [16954] by julie
- remove data translator.
- 13:00 Changeset [16953] by jakub
- First version of list tagging.
- 13:00 Changeset [16952] by jakub
- First version of list tagging.
- 12:01 Changeset [16948] by kmr
- Move get_property_value() into InterMine::Util so it can be used …
- 11:39 MalariaMine edited by julie
- (diff)
- 11:39 MalariaMine edited by julie
- (diff)
- 11:33 Changeset [16947] by julie
- copy tutorial changes from [16937] to 15.0 branch
- 11:16 Changeset [16945] by kmr
- Removed branch for #1712
- 11:16 Changeset [16944] by kmr
- Merge of ticket branch into trunk. Refs #1712.
- 11:10 Changeset [16943] by kmr
- Fixed warning.
- 11:09 Hardware edited by julie
- (diff)
- 11:04 Changeset [16942] by kmr
- Add reference to gene from CDNAClone.
- 10:04 Hardware edited by julie
- (diff)
- 09:51 Hardware edited by julie
- (diff)
- 09:32 Hardware edited by julie
- 09:29 Prerequisites edited by julie
- (diff)
02/10/08:
- 18:30 CommonErrors edited by rns
- (diff)
- 18:10 Changeset [16941] by kmr
- Removed ticket branch. Refs #1676.
- 18:09 Changeset [16940] by kmr
- Merge of branch for #1676 into trunk. Refs #1676.
- 17:53 Changeset [16939] by kmr
- Store stock item after setting all attributes. Refs #1865.
- 17:17 Changeset [16937] by julie
- fix sequence export on malariamine. update properties, tiles, struts …
- 16:23 InterMineTests edited by rns
- (diff)
- 16:22 CommonErrors edited by rns
- (diff)
- 16:20 CommonErrors edited by rns
- (diff)
- 16:19 CommonErrors edited by rns
- (diff)
- 16:07 CommonErrors edited by rns
- (diff)
- 15:59 Changeset [16936] by kmr
- Fix sock query to ignore stocks where the organism_id of the stock …
- 15:42 Changeset [16935] by rns
- Fix some eclipse startup errors and build paths.
- 14:54 Changeset [16933] by contrino
- modmine meta: renaming (experiment, input/output)
- 14:53 InterMineTests edited by rns
- (diff)
- 14:46 InterMineTests edited by rns
- (diff)
- 14:45 CommonErrors edited by julie
- (diff)
- 14:43 Changeset [16932] by kmr
- Fixed StockProcessor? to query only for organisms that are currently …
- 14:43 Changeset [16931] by julie
- copy change [16930] to branch
- 14:40 Changeset [16930] by julie
- added missing tiles to malariamine
- 14:28 InterMineTests edited by rns
- (diff)
- 14:27 EclipseSetup edited by rns
- (diff)
- 14:26 InterMineTests edited by rns
- (diff)
- 14:25 InterMineTests edited by rns
- (diff)
- 14:23 EclipseSetup edited by rns
- (diff)
- 14:23 Changeset [16929] by kmr
- Load all EST and cDNA_clone features from FlyBase?. Refs #1676.
- 14:22 Changeset [16928] by kmr
- Created ticket branch. Refs #1676.
- 12:48 Changeset [16927] by julie
- eclipse projects
- 12:28 Changeset [16926] by kmr
- Fixes for date picker - now pops up correctly and has an icon. Refs #1712.
- 12:21 EclipseSetup edited by rns
- (diff)
- 12:20 EclipseSetup edited by rns
- (diff)
- 12:17 EclipseSetup edited by rns
- 12:12 MacInstallation edited by rns
- (diff)
- 12:10 MacInstallation edited by rns
- (diff)
- 11:54 MacInstallation edited by rns
- 11:54 Prerequisites edited by rns
- (diff)
- 11:07 2008/10/02/11.04 edited by rns
- (diff)
- 11:07 2008/10/02/11.04 edited by rns
- 11:04 Talks edited by rns
- (diff)
- 11:00 Changeset [16924] by kmr
- Remove empty directory.
- 10:37 Prerequisites edited by rns
- (diff)
- 10:33 Changeset [16923] by kmr
- If getObjectStore() throws an error in the InitialiserPlugin?, don't cause …
- 10:16 FAQs edited by julie
- (diff)
01/10/08:
- 17:02 InterMineTests edited by rns
- (diff)
- 17:00 InterMineTests edited by rns
- (diff)
- 16:58 InterMineTests edited by rns
- (diff)
- 16:52 InterMineTests edited by rns
- (diff)
- 16:50 InterMineTests edited by rns
- (diff)
- 16:41 InterMineTests edited by rns
- (diff)
- 16:25 Changeset [16921] by julie
- ensembl perl api
- 16:24 Changeset [16920] by kmr
- Move testmodel class keys file to the right place.
- 15:45 InterMineTests edited by rns
- (diff)
- 15:31 SVNCheckout edited by rns
- (diff)
- 15:23 Changeset [16919] by rns
- Copied [16916] to release 15.0 branch.
- 15:18 Changeset [16918] by rns
- Copied [16916] to release 14.0 branch.
- 15:12 Changeset [16916] by rns
- Fixed bug with error checking in IdResolverFactory?.
- 15:00 Ensembl edited by julie
- (diff)
- 14:05 GettingStarted edited by rns
- (diff)
- 13:58 Changeset [16915] by kmr
- Inital attempt at adding a date picker. Refs #1712.
- 13:54 PostgresBasics edited by rns
- (diff)
- 13:52 PostgresBasics edited by rns
- 13:26 Changeset [16914] by kmr
- Created ticket branch. Refs #1712.
- 12:44 Prerequisites edited by rns
- (diff)
- 12:30 Changeset [16913] by contrino
- modmine meta: added acceptance test on features (their presence and …
- 11:33 Changeset [16912] by kmr
- Fixed stock query again.
- 11:26 Changeset [16911] by kmr
- Fix stock query. Refs #1865.
30/09/08:
- 18:06 Changeset [16910] by kmr
- Add a key for CDNAClone in the biogrid source.
- 18:00 Changeset [16909] by kmr
- Add more information to stocks.
- 17:55 Changeset [16908] by kmr
- Fix type of deletion objects created by drosdel source. Refs #1881.
- 16:47 Changeset [16907] by julie
- ensembl API script, script to make items XML file, remove datatranslator …
- 16:37 Ensembl edited by julie
- (diff)
- 16:36 Ensembl edited by julie
- (diff)
- 16:33 Ensembl edited by julie
- (diff)
- 16:01 Ensembl edited by julie
- (diff)
- 16:00 Ensembl edited by julie
- (diff)
- 15:57 Ensembl edited by julie
- (diff)
- 15:56 Ensembl edited by julie
- (diff)
- 15:56 Ensembl edited by julie
- (diff)
- 15:54 Ensembl edited by julie
- (diff)
- 15:53 Prerequisites edited by jakub
- (diff)
- 15:53 Ensembl edited by julie
- (diff)
- 15:45 Changeset [16905] by julie
- generify the get_ensembl script so it works with any organism, not just …
- 15:41 Ensembl edited by julie
- (diff)
- 15:37 Prerequisites edited by julie
- (diff)
- 15:22 Changeset [16904] by jakub
- Eclipse classpath fix.
- 15:19 Changeset [16903] by mnw21
- Update to trunk
- 14:27 Changeset [16900] by watkins
- Lines to separate cells in outer-joins
- 14:15 Changeset [16899] by watkins
- Fixed non-appearing error messages in query builder
- 14:13 Changeset [16898] by mnw21
- New method to validate order by paths. Refs #1877
- 14:12 Changeset [16897] by mnw21
- Emma still doesn't work with java 1.6
- 14:11 Changeset [16896] by kmr
- Removed ticket branch. Refs #1865.
- 14:08 Changeset [16895] by kmr
- Merge ticket-1865 branch into trunk. Refs #1865.
- 14:05 GettingStarted edited by julie
- (diff)
- 14:02 Prerequisites edited by julie
- (diff)
- 14:02 Prerequisites edited by julie
- (diff)
- 14:01 Prerequisites edited by julie
- (diff)
- 14:01 Prerequisites edited by julie
- (diff)
- 13:54 Prerequisites edited by julie
- (diff)
- 13:53 Prerequisites edited by julie
- (diff)
- 13:52 Changeset [16894] by kmr
- Fix for StockProcessor? - make sure to store() the stocks. Refs #1865.
- 13:50 Changeset [16893] by kmr
- Merge from trunk.
- 13:49 Prerequisites edited by julie
- (diff)
- 13:48 Prerequisites edited by julie
- (diff)
- 13:46 Prerequisites edited by julie
- (diff)
- 13:44 Prerequisites edited by julie
- (diff)
- 13:39 Prerequisites edited by julie
- (diff)
- 13:38 Changeset [16892] by kmr
- Merge from trunk.
- 13:32 Prerequisites edited by julie
- (diff)
- 13:29 Prerequisites edited by julie
- (diff)
- 13:26 Changeset [16891] by kmr
- Better exception message from ItemToObjectTranslator? if the target of …
- 13:19 Prerequisites edited by julie
- (diff)
- 13:10 Prerequisites edited by julie
- (diff)
- 13:04 Prerequisites edited by mnw21
- (diff)
- 12:58 GettingStarted edited by kmr
- (diff)
- 12:54 Prerequisites edited by kmr
- (diff)
- 12:44 Prerequisites edited by julie
- (diff)
- 12:40 Prerequisites edited by julie
- (diff)
- 12:24 Changeset [16890] by kmr
- Link to GBrowse using the primaryIdentifier. Refs #1752.
- 12:02 Changeset [16889] by jakub
- Share project "bio-core-main" into "svn://svn.flymine.org/flymine"
- 11:49 Changeset [16888] by kmr
- Removed branch for #1752
- 11:49 Changeset [16887] by kmr
- Merge of ticket branch into trunk. Refs #1752.
- 11:45 Prerequisites edited by julie
- (diff)
- 11:37 Changeset [16886] by kmr
- Don't write the internal objectstore identifier to the gff output.
- 11:31 Changeset [16885] by kmr
- Link to FlyMine from GBrowse using the primary identifier. Refs #1752.
- 11:23 Prerequisites edited by julie
- (diff)
- 11:00 MaintainingAMine edited by julie
- (diff)
- 10:46 Changeset [16884] by julie
- copy [16881] change to malariamine files in bio/tutorial in branch
- 10:43 Changeset [16883] by julie
- GUI
- 10:40 Changeset [16882] by julie
- copy [16880] change to 15.0 branch
- 10:26 Changeset [16881] by julie
- rename intermine.log to malariamine.log and remove bioJavaMapping.log
- 10:00 Changeset [16880] by julie
- set velocity.properties to not create log file
29/09/08:
- 18:48 Changeset [16879] by kmr
- Link from gbrowse to modmine using the primary identifier.
- 17:50 Changeset [16878] by mnw21
- Update to trunk
- 17:46 Changeset [16877] by mnw21
- Fix checkstyle
- 17:24 Changeset [16876] by mnw21
- Fix test
- 16:51 Changeset [16875] by mnw21
- Update to trunk
- 16:33 Changeset [16873] by mnw21
- Pruning old branches - use the outerjoins_in_the_webapp_16418 branch
- 16:32 Changeset [16872] by kmr
- Created ticket branch. Refs #1752.
- 16:23 Changeset [16871] by mnw21
- Changes from 16583 branch
- 15:52 Changeset [16870] by kmr
- Merge trunk changes.
- 15:40 Changeset [16869] by mnw21
- Merged change 16855 from release 14 branch - new properties for data …
- 15:38 Changeset [16868] by mnw21
- Merged change 16853 from release 14 branch - New property to log explains
- 15:36 Changeset [16867] by mnw21
- Merged change 16852 from release 14 branch - Better error message when …
- 15:35 Changeset [16866] by mnw21
- Merged change 16851 from release 14 branch - avoid out of memory while …
- 15:34 Changeset [16865] by mnw21
- Merged change 16849 from release 14 branch - new ParallelBatchingFetcher?
- 15:32 Changeset [16864] by mnw21
- Merged change 16848 from release 14 branch - Remove explains on a query
- 15:31 Changeset [16863] by mnw21
- Merged changes from release 14 branch - altered toString methods for …
- 15:30 Changeset [16862] by mnw21
- Merged changes from release 14 branch - parameterised ObjectPipe?
- 15:29 Changeset [16861] by kmr
- Ignore features that aren't in the features map.
- 15:20 Changeset [16860] by kmr
- Merge from trunk.
- 15:01 Changeset [16859] by julie
- remove biojava logging, rename log files
- 14:55 Changeset [16858] by watkins
- Merged trunk into branch
- 14:54 Changeset [16857] by kmr
- Merge from trunk.
- 14:54 Changeset [16856] by julie
- checkstyle
- 14:51 Changeset [16855] by mnw21
- New properties to allow multiple errors and switch off the parallel …
- 14:48 Changeset [16854] by kmr
- Documentation fix.
- 14:47 Changeset [16853] by mnw21
- New option to log EXPLAIN text
- 14:47 Changeset [16852] by mnw21
- Better error message when finding a conflict between two objects of the …
- 14:46 Changeset [16851] by mnw21
- Don't run out of memory logging an error while loading
- 14:45 Changeset [16850] by mnw21
- Checking in change 16676 from trunk - backslashes in queries
- 14:42 Changeset [16849] by mnw21
- New parallel batching fetcher, may run slightly faster than normal …
- 14:39 Changeset [16848] by mnw21
- Switch off explains on a query that was causing a bug
- 14:39 Changeset [16847] by kmr
- Add Stock to the model and fix StockProcessor?. Refs #1865.
- 10:17 MaintainingAMine edited by julie
- 09:52 Changeset [16846] by julie
- cp changes to 15.0 branch: [16805], [16804], [16803] and [16819]
- 09:43 Changeset [16845] by julie
- copy [16801] change to branch
- 09:43 Changeset [16844] by julie
- copy the model the to jar.
26/09/08:
- 17:50 Changeset [16843] by mnw21
- Change the toString method of data objects so it doesn't print collections
- 17:24 Changeset [16842] by mnw21
- Parameterise ObjectPipe?
- 16:42 Changeset [16841] by julie
- gui
- 15:32 Changeset [16840] by kmr
- Update to trunk.
- 15:18 Changeset [16839] by kmr
- Update to trunk.
- 15:08 Changeset [16838] by kmr
- Added the stock processor to flymine. Refs #1865.
- 14:08 Changeset [16837] by kmr
- Update to trunk.
- 14:02 Changeset [16836] by kmr
- Added StockProcessor? and added ChadoDBConverter.findProcessor() Refs …
- 14:00 Changeset [16835] by julie
- branch for #1867
- 14:00 Changeset [16834] by kmr
- Undo change from [16831] that was for the #1865 branch.
- 13:55 Changeset [16833] by julie
- branch for #1866
- 12:45 Changeset [16832] by kmr
- Update to latest trunk.
- 12:35 Changeset [16831] by kmr
- Remove the work "Module" from chado class names.
- 12:07 Changeset [16830] by watkins
- Fixed layout for outer join case
- 11:54 Changeset [16828] by contrino
- minor
- 10:29 Changeset [16827] by watkins
- Drag and drop table columns and fixed sorting
- 10:29 Changeset [16826] by watkins
- Drag and drop table columns and fixed sorting
25/09/08:
- 15:44 Changeset [16825] by julie
- correct default values for quicksearch
- 15:31 Changeset [16823] by julie
- remove obsolete entries
- 15:25 FlyMineFAQ edited by julie
- (diff)
- 15:21 FlyMineFAQ edited by julie
- (diff)
- 15:20 FAQs edited by julie
- (diff)
- 14:39 Changeset [16821] by kmr
- Merged [16757] into 15.0 branch.
- 14:16 Changeset [16820] by julie
- correct default values in quicksearch
- 14:15 Changeset [16819] by julie
- correct malariamine's properties. malariamine.flymine.org doesn't exist.
24/09/08:
- 17:49 Changeset [16816] by contrino
- modmine meta: experimentInData (Ticket #1820)
- 16:54 Changeset [16815] by watkins
- Remove from view with startsWith and not equals
- 16:31 Changeset [16814] by watkins
- Fixed little javascript glitches
- 16:31 Changeset [16813] by watkins
- Fixed little javascript glitches
- 16:12 Changeset [16812] by julie
- change widget order
- 16:08 FlyMineOwnData edited by julie
- (diff)
- 15:30 MirrorHowTo edited by julie
- (diff)
- 15:16 Changeset [16811] by kmr
- Merged [16796] into 15.0 branch.
- 14:47 Changeset [16810] by kmr
- Created ticket branch. Refs #1865.
- 14:45 MirrorHowTo edited by julie
- (diff)
- 14:45 FlyMineOwnData edited by julie
- (diff)
- 14:41 MirrorHowTo edited by julie
- (diff)
- 14:39 MineHowTo edited by julie
- (diff)
- 14:35 MalariaMine edited by julie
- (diff)
- 14:33 SVNCheckout edited by julie
- (diff)
- 14:28 BuildingTestmodelApp edited by julie
- (diff)
- 14:25 BuildingTestmodelApp edited by julie
- (diff)
- 14:20 Changeset [16809] by kmr
- Merge [16808] into 15.0 branch.
- 14:13 Changeset [16808] by kmr
- Updated GBrowse configuration for 15.0
- 13:36 Changeset [16807] by kmr
- Merged [16806] into 15.0 branch.
- 11:42 Ensembl edited by julie
- (diff)
- 11:35 Ensembl edited by julie
- (diff)
- 11:16 SVNCheckout edited by julie
- (diff)
- 10:06 Ensembl edited by julie
- (diff)
- 10:05 Ensembl edited by julie
- (diff)
- 10:04 Ensembl edited by julie
- (diff)
- 09:58 Ensembl edited by julie
- (diff)
- 09:55 Ensembl edited by julie
- 09:39 BioSources edited by julie
- (diff)
- 09:26 Changeset [16806] by julie
- rearrange widgets per gos
23/09/08:
- 16:55 MalariaMine edited by julie
- (diff)
- 16:45 Changeset [16805] by julie
- removed obsolete entries from properties files
- 16:20 Changeset [16804] by julie
- removed obsolete tiles. added new tile to malariamine
- 16:07 Changeset [16803] by julie
- updated webconfig for malariamine
- 13:48 MalariaMine edited by julie
- (diff)
- 13:43 Changeset [16801] by julie
- copy model to jar for malariamine
- 11:39 Changeset [16800] by julie
- checkstyle
- 11:21 Changeset [16799] by contrino
- modmine: correction to set up for fasta wormbase
- 11:19 Changeset [16798] by contrino
- modmine script: improvements
- 10:36 Changeset [16797] by julie
- updated malariamine's webconfig with new interaction classes
- 10:15 Changeset [16796] by julie
- change widget order, per Gos request
22/09/08:
- 17:08 Changeset [16795] by julie
- updated malariamine project.xmls
- 16:45 Changeset [16794] by julie
- malariamine webapp
- 16:31 Changeset [16793] by julie
- malarimine properties files
- 16:26 Changeset [16792] by julie
- added objectstoresummary.config.properties for malariamine, moved some …
- 16:22 Changeset [16791] by julie
- moved class_keys.properties for malariamine
- 16:20 Changeset [16790] by julie
- malariamine
- 16:05 MalariaMine edited by julie
- (diff)
- 16:04 MalariaMine edited by julie
- (diff)
- 16:04 MineProperties edited by julie
- (diff)
- 16:03 WebappConf edited by julie
- (diff)
- 12:06 Changeset [16789] by watkins
- Correct image is displayed for outer join in query overview depending on …
- 12:06 Changeset [16788] by watkins
- Correct image is displayed for outer join in query overview depending on …
- 11:24 Changeset [16785] by kmr
- Merged [16770], [16772], [16774], [16775], [16779], [16780] and [16784] …
- 09:38 RunningABuild edited by contrino
- (diff)
20/09/08:
- 22:47 Changeset [16782] by kmr
- Add --local flag to bp_bulk_load_gff.pl
19/09/08:
- 17:13 Changeset [16781] by contrino
- modmine meta: corrected xml project file
- 16:32 MalariaMine edited by julie
- (diff)
- 16:32 MalariaMine edited by julie
- (diff)
- 16:31 MalariaMine edited by julie
- (diff)
- 16:19 MalariaMine edited by julie
- (diff)
- 15:59 Changeset [16780] by julie
- update malariamine's keys with new interaction classes
- 15:51 Changeset [16779] by jakub
- Fixed problems with order in export.
- 15:49 Changeset [16778] by contrino
- modmine meta: added url to labs (is the one of the project) and modified …
- 15:03 Changeset [16777] by jakub
- Fixed problem of displaying invalid column names under certain …
- 13:44 MineProperties edited by julie
- (diff)
- 13:42 WikiStart edited by julie
- (diff)
- 13:19 Changeset [16775] by jakub
- Refactoring
- 13:17 Changeset [16774] by jakub
- Added formating column names to export and addColumns feature and code …
- 13:13 Changeset [16773] by jakub
- More comprehensive message
- 12:49 Changeset [16772] by kmr
- Add a Note attribute to gff features for GBrowse. The Note contains …
- 12:31 Changeset [16771] by julie
- checkstyle
- 12:27 MineExampleSources edited by julie
- (diff)
- 12:26 MineExampleSources edited by julie
- (diff)
- 12:19 MalariaMine edited by julie
- (diff)
- 11:54 Changeset [16770] by kmr
- Fixed GBrowse typo.
- 11:33 MalariaMine edited by julie
- (diff)
- 11:30 MalariaMine edited by julie
- (diff)
- 11:24 Changeset [16769] by contrino
- modmine: some correction to the acceptance tests
- 11:18 MalariaMine edited by julie
- (diff)
- 11:00 MalariaMine edited by julie
- (diff)
- 10:46 PostProcessing edited by julie
- (diff)
- 10:45 PostProcessing edited by julie
- (diff)
- 10:37 ObjectStoreSummaryProperties edited by julie
- (diff)
18/09/08:
- 17:26 Changeset [16768] by kmr
- Merged [16765] into 15.0 branch.
- 17:19 Changeset [16767] by kmr
- Merge [16757] and [16758] into 15.0 branch.
- 17:08 MalariaMine edited by julie
- (diff)
- 17:02 MalariaMine edited by julie
- (diff)
- 16:58 MalariaMine edited by julie
- (diff)
- 16:49 MalariaMine edited by julie
- (diff)
- 16:38 MalariaMine edited by julie
- (diff)
- 16:24 Changeset [16766] by contrino
- modmine tile: now ordering by publicReleaseDate
- 15:40 Changeset [16765] by adrian
- Changes to the fix a rendering error in query builder - affected firefox …
- 14:57 Changeset [16764] by kmr
- Merged [16762] into 15.0 branch.
- 14:57 Changeset [16763] by kmr
- Merge [16761] into 15.0 branch.
- 14:50 Changeset [16762] by kmr
- Don't escape HTML in results tables so that "&bgr;Tub85D[7]" from …
- 14:36 Changeset [16761] by julie
- update to be compatible with UniProt 14.1 trembl names
- 14:05 Changeset [16760] by julie
- another acceptance test
- 10:15 Changeset [16759] by julie
- remove obsolete queries
17/09/08:
- 18:41 Changeset [16758] by watkins
- Upgraded the news system to use ajax
- 18:41 Changeset [16757] by watkins
- Upgraded the news system to use ajax
- 17:32 Changeset [16756] by kmr
- Merged [16755] into 15.0 branch.
- 17:32 Changeset [16755] by kmr
- Remove TransposableElementInsertionSite?.name from web config as it's …
- 17:25 Changeset [16754] by kmr
- Merged [16753] into 15.0 branch. Refs #1860.
- 16:57 Changeset [16753] by kmr
- Fix contains constraints to quote wildcards.
- 16:29 Changeset [16752] by contrino
- modmine tile: now not displaying chromosome in the feature tally …
- 15:54 Changeset [16751] by julie
- 15.0 branch
- 15:51 Changeset [16750] by julie
- tag for release 15.0
- 15:22 Changeset [16749] by julie
- update converter to be compatible with version 14.1
- 11:29 Changeset [16748] by julie
- testmodel build fix. Refs #1828
- 11:28 Changeset [16747] by julie
- checkstyle
- 11:27 Changeset [16746] by julie
- more acceptance tests
- 10:56 Changeset [16745] by kmr
- Dump after do-sources.
16/09/08:
- 16:44 Changeset [16744] by adrian
- Added linkouts from gene report pages for: Unigene, Homologene, and Entrez …
- 16:29 Changeset [16742] by contrino
- modmine meta: gingeras is tom
- 16:25 Changeset [16741] by watkins
- Made widgetdata div higher so it doesn't overflow
- 15:34 Changeset [16740] by watkins
- TEMPORARY CHANGE: flymine layout.jsp overwrites intermine's to display the …
- 15:33 Changeset [16739] by watkins
- Capitalised all menu items
- 13:34 Changeset [16738] by kmr
- Changed all references to ArtificialDeletion? to ChromosomalDeletion?.
- 13:17 Changeset [16737] by kmr
- Changed Util.wildcardSqlToUser(), Util.wildcardUserToSql() to fix …
- 11:31 Changeset [16736] by jakub
- Fixed problem with ...chromosome.chromosomeLocation causing problems with …
- 11:29 Changeset [16735] by jakub
- Fixed back button problems in browser when old table without new columns …
- 11:28 Changeset [16734] by julie
- show allele.alleleClass. Fixes #1807
- 10:36 Changeset [16733] by julie
- remove pim source. We are already getting this information from IntAct
- 10:30 Changeset [16732] by julie
- set synonym key for miranda
- 09:56 Changeset [16731] by contrino
- modmine: adapting acceptance test to modmine
- 09:54 Changeset [16730] by contrino
- modmine meta: added transcript region
- 09:52 Changeset [16729] by contrino
- modmine meta: added transcriptRegion
15/09/08:
- 17:07 Changeset [16728] by julie
- more config for interactions
Note: See TracTimeline for information about the timeline view.
